PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035029.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 276aa    MW: 31187.6 Da    PI: 10.1602
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.71.5e-191562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd++l+ +++++G ++W++ +++ g++R++k+c++rw++yl
      PCP035029.1 15 RGPWTPEEDKRLLAYIQLHGHRSWSSLPQKAGLKRCGKSCRLRWRNYL 62
                     89*********************************************7 PP
2Myb_DNA-binding51.52.4e-1668112147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++  Ed+ +++++++lG++ W++Ia++++ +Rt++++k++w+ +
      PCP035029.1  68 RGNFSLHEDQTIIQLHALLGNR-WSAIAAHLP-KRTDNEIKNYWNAH 112
                      89********************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGKSSGYAPE SGIKRGPWTP EEDKRLLAYI QLHGHRSWSS LPQKAGLKRC GKSCRLRWRN  60
YLRPDIKRGN FSLHEDQTII QLHALLGNRW SAIAAHLPKR TDNEIKNYWN AHLKKRLAKM  120
GFDPVTHKSK AAILASANGD PKMLSNLSHI AQWESARLQA EARFVKESFL RMPESAPAVS  180
LFDDYHQLAP PIVPQCLDML EASAWESLIS MSKSSSRSAA LTNDINGLDH HHVHDHGLNM  240
NGQDCGPNFQ VPISDQQLSS LMGLMKQRRH QQPLDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.13e-87MYB family protein