PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035294.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 153aa    MW: 17741.2 Da    PI: 9.2791
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035294.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.73.2e-5571351128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                  +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd+++     ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls 
  PCP035294.1   7 VPPGFRFHPTEEELVGYYLKRKINSLQIDL-DVIVDIDLYKIEPWDIQArckLGYSEKNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKAVLS- 102
                  69****************************.99**************953432234677**************************************. PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  k++ +g++ktLvfykgrap+g+ktdW+mheyrl
  PCP035294.1 103 KNNIIGMRKTLVFYKGRAPNGNKTDWIMHEYRL 135
                  8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLKRKIN SLQIDLDVIV DIDLYKIEPW DIQARCKLGY  60
SEKNEWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKAV LSKNNIIGMR KTLVFYKGRA  120
PNGNKTDWIM HEYRLQTSEH APPQASSSIS SID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.19e-84NAC family protein