PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035309.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 205aa    MW: 22978.6 Da    PI: 8.9539
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035309.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-11249454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  PCP035309.1  2 SHIAVERNRRKQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                 89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSHIAVERNR RKQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH RVLQSLESNK  60
RRKSISPSPN PSPRPVVALP QKYPTATQPH QNPDFNFNLG TENRHHVINK ELAIGASCNS  120
PVADVEAKIS GSNVVVKIIS WRIPGQIAKI IGMFERLSFD VLHLTISSME DTVLYSFVIK  180
IGLECQLSVE ELVLEVQQSL CSDAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-74bHLH family protein