PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035446.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 148aa    MW: 17360.6 Da    PI: 9.4366
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035446.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.12.3e-5571361129
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                  +ppGfrFhPtdeelv++yL+kk+++k++++ +v+++vd+yk+ePwdL+   k+ + +++ewyfF ++dkky+tg+r+nratk+g+Wkatg+dk++++ 
  PCP035446.1   7 VPPGFRFHPTDEELVDYYLRKKTASKPIDF-DVVRDVDLYKIEPWDLEDlcKIGSgDQNEWYFFNHKDKKYPTGHRSNRATKAGFWKATGRDKAIYR- 102
                  69****************************.99**************943466553556**************************************. PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                  ++ lvg++ktLvfykgrap+g+k+dW+mheyrle
  PCP035446.1 103 GKFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                  999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MDTLSHVPPG FRFHPTDEEL VDYYLRKKTA SKPIDFDVVR DVDLYKIEPW DLEDLCKIGS  60
GDQNEWYFFN HKDKKYPTGH RSNRATKAGF WKATGRDKAI YRGKFLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETSEN GTPQASTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.12e-89NAC family protein