PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035608.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LBD
Protein Properties Length: 108aa    MW: 11626.2 Da    PI: 8.2308
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035608.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26031.64.5e-106631774
       DUF260 17 vlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvy 74
                 +lapyfp++ p +  n+h+lF + ++ +l+ alp + r+ ams+++ eA+  a++ v 
  PCP035608.1  6 PLAPYFPSNYPTNSHNAHELFDVGRLEQLVIALPLHLRNPAMSTIFVEADQHAKNSVG 63
                 58*************************************************9999765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MHRGLPLAPY FPSNYPTNSH NAHELFDVGR LEQLVIALPL HLRNPAMSTI FVEADQHAKN  60
SVGAATLPGR CSGPSTSTRR NSTACATSSN CAAAAAMLWL QCAYRECV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.12e-07LBD family protein