PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP035863.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 239aa MW: 27268.6 Da PI: 8.7234

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP035863.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.2	4.5e-14	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++lv +++++G +W+ ++ g+ R++k+c++rw +yl PCP035863.1 16 KGPWSPEEDQKLVVYIQRYGIWNWSQMPKPAGLARSGKSCRLRWVNYL 63 79****************99**********************97 PP
2	Myb_DNA-binding	55.2	1.6e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+e ++++++ G++ W++Ia++++ gRt++++k++w+++l PCP035863.1 69 RGNFSKDEEETILELHQAIGNR-WSAIAARLP-GRTDNEIKNHWNTHL 114 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MAKRTQRCEK TVARKKGPWS PEEDQKLVVY IQRYGIWNWS QMPKPAGLAR SGKSCRLRWV 60 NYLRPDIKRG NFSKDEEETI LELHQAIGNR WSAIAARLPG RTDNEIKNHW NTHLKKRFKA 120 AIESVHEEAK GFGDKEASKN KLSETEQLFL VDEATRASSS KMETTSSTSA SSRLFCPVWE 180 FDDRKGQIAE QSICASGVTF GDLQSLDSQV WQQEPIFPCD SYINHATSDD WVSLINKTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G05100.1	2e-56	MYB family protein