PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP035998.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 238aa    MW: 25829.8 Da    PI: 6.7731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP035998.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-183787155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++kGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  PCP035998.1 37 KKFKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 87
                 59*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVKSERRILQ LPSVMTSSKT TSTSSSSSSS SSSACKKKFK GVRMRSWGSW VSEIRAPNQK  60
TRIWLGSYST AEAAARAYDA ALLCLKGSSA NLNFPTTASS HFIPQEMTVI SPKSIQRVAA  120
AAANSFVLDN NAATTTANIA LPPSAPPQST SSSSLVSSPS MSSSPSSNLI DDDLSSLMGA  180
FGGSYTPTYY DQSNDQLPMF SMDSWNNFDQ MFDGAWDPHP HMMYDLYEES DIRLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-37ERF family protein