PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036037.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 215aa    MW: 21979.2 Da    PI: 6.6268
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036037.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.73.6e-5825120297
        NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                  reqdrflPianvsrimkk+lPanakiskdaket+qecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+kyre+egek
  PCP036037.1  25 REQDRFLPIANVSRIMKKALPANAKISKDAKETLQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEK 120
                  89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MADSDNDSGG PNDVSHGQSG ELSAREQDRF LPIANVSRIM KKALPANAKI SKDAKETLQE  60
CVSEFISFVT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKIYL QKYREMEGEK  120
STMGGGGGGR EKDSSSGGGG AASGGGGGGG VSSGISGGGY NGGYGGMVMM GQHNHHQGHM  180
YGSGGGYQQH HMGMGGGGVG KSGGSSGGCG ASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-69NF-YB family protein