PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036084.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 208aa    MW: 23644.9 Da    PI: 9.7717
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036084.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP79.55e-2565124261
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrs 61 
                  C v+gC+adls+++eyhr+h++Ce  sk+pvv+v+ +++rfCqqCsr h+l e De++ +
  PCP036084.1  65 CLVDGCRADLSRCREYHRQHRICELRSKTPVVVVKREQKRFCQQCSRVHSLVELDEGRGA 124
                  ********************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEWDFKDIDL DALVGTSISQ PQMKNRPAES LGLDFKKLQE DPIKLSSSRR INGSNNGSDH  60
LKVLCLVDGC RADLSRCREY HRQHRICELR SKTPVVVVKR EQKRFCQQCS RVHSLVELDE  120
GRGAAENVSM ELNHQQSNQS TPSVPSKKKN WNPRNRPSMI FVKWERRGRW REARLSLGEP  180
RELTSWSLAV VLGACAHGCA PSSALQTP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198104VKREQKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.16e-24SBP family protein