PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036231.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family M-type_MADS
Protein Properties Length: 95aa    MW: 10159.6 Da    PI: 6.7888
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036231.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF39.19.3e-131312151
                 HHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyeyss 51
                 +KKA ELS+LC+ e+aviifs+t+kl ++ss
  PCP036231.1  1 MKKAGELSILCESEAAVIIFSQTDKLLDFSS 31
                 8***************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MKKAGELSIL CESEAAVIIF SQTDKLLDFS SSRTRGEDSS AASILASSVF YLVPSTRHGE  60
GLRLPAGRIP ISAIASFPSS HINSTHEIPI IPVNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22630.14e-09MIKC_MADS family protein