PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036371.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 128aa    MW: 14494.9 Da    PI: 4.8784
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036371.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.51.4e-1557122171
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71 
                  +fYn Y+ke GF +r+s+s  +++ +e +++++ Cs  g++++++ +     ++r+etrtgC a++++++ 
  PCP036371.1  57 DFYNIYGKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVVIRLV 122
                  6*********************999*****************99888.....9***************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MEQVSLNTEP VFDEGDDYEL EGDCTEHDNG TGETHRKKDP REPTVGSEFD SFDEAYDFYN  60
IYGKEQGFGI RVSNSWFRSK RKERYRAKLS CSSAGFKKKS EANNPRPETR TGCPAMVVIR  120
LVAPNGGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.16e-28FAR1 family protein