PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036374.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 143aa    MW: 16090.4 Da    PI: 4.7268
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036374.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543.1e-1727116196
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                  f+ v t+++v  s ++v+p kf ++    + +s   t+ +  g+ We+++  + +sg+  + ++W+eFv++n+Lk+gD +vF+l + s+++lv++v
  PCP036374.1  27 FEVVITKANVKPSYQMVIPAKFQQTL---PSCS-IPTVLTFGGKNWEMTY--THGSGQRKFDTNWREFVNDNNLKVGDACVFELLECSSTKLVFRV 116
                  77889999999***********8655...3344.4577899*********..888888889**********************8755777777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MGDQPTSNSM IELQGDEFWP LSEKPFFEVV ITKANVKPSY QMVIPAKFQQ TLPSCSIPTV  60
LTFGGKNWEM TYTHGSGQRK FDTNWREFVN DNNLKVGDAC VFELLECSST KLVFRVQILR  120
GDIPSELLGK LKGETVDAPI IID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-10B3 family protein