PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036410.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 159aa    MW: 18092.2 Da    PI: 8.2409
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036410.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.96.1e-108322348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia +++ gRt++q+k++w+++l
      PCP036410.1  8 RWSLIAGRVP-GRTDNQVKNHWNSHL 32
                     4*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MIISCLIRWS LIAGRVPGRT DNQVKNHWNS HLSKKLGVSS KRGKPKAKTY SDSKRAKNNF  60
CTPSSESNSK LQPLPNSESN SKIFGDHEAA AAIDGFDDEM MNIQDHSFSK SKVGFSGMWE  120
ATMVSNEKFW FHNDDLNLYS PYLRDPTLDD HYPFQFDNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.16e-15MYB family protein