PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036482.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 372aa    MW: 40923.8 Da    PI: 6.2343
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036482.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.66.9e-16140186455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  PCP036482.1 140 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 186
                  6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MGDTYECDRY YKNATCSSSP PAAPPHSAAD DMSLFLQQIL VRSSSSLASG KAPQSLFSSS  60
PSVGALLPGN LDRPCHSGFL GDGIPAVDSF AAFVSGHPNG ASENEADEYD CENEEGLEAF  120
VEARRGGGRS SSKRSRAAEV HNLSEKRRRS RINEKMKALQ NLIPNSNKTD KASMLDEAIE  180
YLKQLQLQVQ MLSMRNGMSL HPWCLPGTLQ PLQLSQMRME LGEENRPLHL DMTGTLHMNQ  240
ESSTQNLFNL SNQCTAANKS YVPDMSNVVN LETSFGLEPS IQSHLGPFQL PASSQEICRD  300
NLLQHQKIDA KHSEMNLSAT VSLPLIAQVS DRKSTFDTCI IGRDGQGGGL LKSIEQNFHI  360
DRKKALERYH QD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-63bHLH family protein