PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036627.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 193aa    MW: 22492.5 Da    PI: 10.6988
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036627.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.13.6e-123786246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     ++WT+eE+  l+ +v ++G g W+tI +         +R+  ++k++w++
      PCP036627.1 37 QKWTAEEESALKAGVIKHGAGKWRTILKDPEfsgvlYTRSNVDLKDKWRN 86
                     69***********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MNSDTTIKSR AELSKMLDLR REKERELCFQ ASPKRLQKWT AEEESALKAG VIKHGAGKWR  60
TILKDPEFSG VLYTRSNVDL KDKWRNMSVM ANGWGSREKA RTALRTLWLS VMLLKAMMKT  120
WKLSLFQLPV RPSRFLVPEN LFFETNKSCA IRQVDLFVNV IHDILKGLDW LDMEAITRLR  180
SLVDLIKRLL LDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-40MYB_related family protein