PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036633.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 245aa    MW: 27725.6 Da    PI: 4.9657
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036633.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding537.8e-171457146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg+ + eE+el+++++k+lG++ W++Ia +++ gRt++++k++w++
      PCP036633.1 14 RGNISSEEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 57
                     7899******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MARSSSKSWP GIKRGNISSE EEELIIRLHK LLGNRWSLIA GRLPGRTDNE IKNYWNTSLS  60
KKTEQGSDKA PHERSSTAKS NEYTPKPKSE SKSHRTVQVI RTKAFKCRKV VIPSHLDGHD  120
QMVDRSNVNP GLVPCESPSP SGAQDHQEDS PLCGMLIDFN IDDLISDLLN TDKFLQDQIN  180
KCDQEMEDGI TKLEDLTGEA MLENWTATDH DHHDDPIFQP NDDQDRVDRL NAISYFLNSE  240
DGDEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.11e-27MYB family protein