PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP036749.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 94aa    MW: 10720.2 Da    PI: 5.907
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP036749.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H224.56.7e-086586223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 +C+ Cg +F+ + +Lk+H+++H
  PCP036749.1 65 TCEECGATFKKPAHLKQHMQSH 86
                 6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MDNEEADQKV PIFIDIRRYY CEFCGICRSK KALIASHILD HHKGEMDMEK EAGGEGEGEK  60
INSNTCEECG ATFKKPAHLK QHMQSHSLEV FVFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.22e-21C2H2 family protein