PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP036854.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 518aa MW: 58961.5 Da PI: 4.1995

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP036854.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.4	6.9e-08	255	303	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 + W++eE++l+ ++v + lG++ W++ + ++ Rt k+++s+++++ PCP036854.1 255 QTWSEEEEQLFHRVVfstpTSLGKNFWDKLSTVFP-SRTKKEIVSYYFNV 303 79***********5555667777******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MSVFEFNMVQ KRSLDDEEIF VSFKHPRQVG HNKELVSFSE SVFPGDVSQE PETLENGCAK 60 DKNRSEEEIS DDKFSGLPKG SEDVETSASR SFTISSWATS STSGEDSLFE ALFHGSFFPE 120 YFNHERSIRT LTQFEDIYSV LLDHPPRKSA SIGPEHQADV PLWGAQGAPN NFDLEDEKRL 180 MGTCVIPMPD SDTELFTDTG CIVGKGRIDC SCEDGESVRC VRQHILEARE KLVKTIGPKR 240 FEELGFNDMG EQVTQTWSEE EEQLFHRVVF STPTSLGKNF WDKLSTVFPS RTKKEIVSYY 300 FNVFMLRKRA EQNRYDPMNI DSDNDEWQGS NDYGDNQPSV TEDEDSVVES PEGRRVPGYN 360 RNWKDDLEVF DEDDTDETCD DNVDVDMFGR GPEQILDRCY GLVDNCSSCP IPQLQDKISW 420 DEKVDQEVQD DSCTSVDAAV AASQESQRKP EDGNHWSGSF NRGDHEYVLE PCDAKIWDAG 480 YMTFPKNKVD FLPTSNMIEE VFGKESWNYK ARDGKNLG

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MSVFEFNMVQ KRSLDDEEIF VSFKHPRQVG HNKELVSFSE SVFPGDVSQE PETLENGCAK  60
DKNRSEEEIS DDKFSGLPKG SEDVETSASR SFTISSWATS STSGEDSLFE ALFHGSFFPE  120
YFNHERSIRT LTQFEDIYSV LLDHPPRKSA SIGPEHQADV PLWGAQGAPN NFDLEDEKRL  180
MGTCVIPMPD SDTELFTDTG CIVGKGRIDC SCEDGESVRC VRQHILEARE KLVKTIGPKR  240
FEELGFNDMG EQVTQTWSEE EEQLFHRVVF STPTSLGKNF WDKLSTVFPS RTKKEIVSYY  300
FNVFMLRKRA EQNRYDPMNI DSDNDEWQGS NDYGDNQPSV TEDEDSVVES PEGRRVPGYN  360
RNWKDDLEVF DEDDTDETCD DNVDVDMFGR GPEQILDRCY GLVDNCSSCP IPQLQDKISW  420
DEKVDQEVQD DSCTSVDAAV AASQESQRKP EDGNHWSGSF NRGDHEYVLE PCDAKIWDAG  480
YMTFPKNKVD FLPTSNMIEE VFGKESWNYK ARDGKNLG