PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP036857.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 178aa MW: 20781.3 Da PI: 7.3214

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP036857.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.3	1.7e-28	8	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyat.gkrkn.ratk..sgyWk.atgkdk 90 lp+GfrF Ptdeelv++yL +kv +++++++ i+e+d y+ +P++L +++ +e+ew+fF+++ ++++ ++r++ r++ g+Wk + g+++ PCP036857.1 8 LPVGFRFMPTDEELVTHYLMNKVLYRPVPAAQEIREIDaarFYSNHPKNLV-TFSCGEREWFFFIHQGESSHAsQTRSSiRVVGngLGFWKpEYGSET 104 79***********************888776666653448999*6.777899**9998876641333331454434689778** PP NAM 91 evlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 ++++++g+ k +L++++g +a+++++t+W m ey l PCP036857.1 105 PICDEDGSFFASKISLTYFSGrSASHAKRTHWKMVEYYL 143 ***************995678899*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MIIGSNQLPV GFRFMPTDEE LVTHYLMNKV LYRPVPAAQE IREIDAARFY SNHPKNLVTF 60 SCGEREWFFF IHQGESSHAS QTRSSIRVVG NGLGFWKPEY GSETPICDED GSFFASKISL 120 TYFSGRSASH AKRTHWKMVE YYLHEHDHVE SNTEEKYQVR RREWIVGRMI RGTDYTGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-18	NAC family protein