PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037104.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LBD
Protein Properties Length: 127aa    MW: 13969.7 Da    PI: 6.2163
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037104.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26060.64.3e-1996346100
       DUF260  46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                  + +lpe++r+da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++la +++e
  PCP037104.1   9 VCELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLAIAQAE 63 
                  56899*********************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MTIKDKSVVC ELPEHQRSDA VSSMVYEANA RVRDPVYGCV GAISSLQQQI DALQTQLAIA  60
QAEVVHMRMG QFPTTTAIAS TTTCSPDQKM APDNSHHHRN HQTATTKSFF SMDIVDQANM  120
GESLWSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.19e-32LBD family protein