PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP037144.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 861aa MW: 94594.7 Da PI: 7.1056

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP037144.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.5	8.6e-12	706	752	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+E++RR+r+N++f Lr+++P+ K++ ++ L Av YI++L+ PCP037144.1 706 NHVEAEKQRRERLNHRFCVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 752 899*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 861 aa Download sequence
MATIIALDSM NLVHHFLVIV LLLIIPWAAP LSFDFPTFQQ SDLTNGTGLL ITEGDAVIAN 60 QSIHLTKEYV GGETTHGSVG RATYGEPFLL RDKDTRKLAD FNTSFTFRFD GKNSTVPPHD 120 QGLAFFLALN GSLLNRALRV GGNMGLPGNN SVENVTEPSN EYPFVAVEFV TFRNSRSTVE 180 DPDCGHVGIK INSSNNITKP WNSGIMEGEH NRAWIGYNSS SKNLSVSLTT YVNDAREQVI 240 ISLSSLVDLN KYLPDWVIVG FSSSTGTAPA LVDIMSWDFT STSLVGDGSL ALFSQEKKGQ 300 SLVPEPSPRT NNVKSRRRKK RMGVVISSAI GGFILACILG LGLYNSCKKR ATGGRADTDL 360 TIPNELGEEI SLKKFSHKEL ARATRNFFDG ELLGVGRYGA FYKGCIKEWN IHVAVKKMSR 420 SELVLKEYAS QITIISRLAH RNLVQLLASK DSSSDQVSLS WAGGHFQCTC DHLASKISNQ 480 VNREFEALLH DDVMDLDMRL VDHGDVTDSE LFYFYAVSLT QSFSASHGNN SDNILGRAFG 540 SGGFVWLAGD HEFQFYECER VKEARMHGIQ TLVCIATPCG VVELASLDVI KEDYGLVHLS 600 KSLFGSDGNN NNNRRLSKQQ TSREGNILDP ILENELFSAD QIELTRQDAG GINEAAPINV 660 GGSSPESPSN SVGNFTSENT KNKTRSKNRG RSSNNGAASR QSQLSNHVEA EKQRRERLNH 720 RFCVLRSVVP NVSKMDRSSL LADAVAYINQ LKSKVEELDA KVQEQPQKPK AGNNTTAASV 780 VEVDVYVKVM GSEAKIRVQS PDQDYPYAKL MNALKGLGLQ VYHASISSVK ELMIQDVVAR 840 LPYGFTSEEV LRNGIIKGWS H

Sequence ? help Back to Top

Protein Sequence Length: 861 aa Download sequence

MATIIALDSM NLVHHFLVIV LLLIIPWAAP LSFDFPTFQQ SDLTNGTGLL ITEGDAVIAN  60
QSIHLTKEYV GGETTHGSVG RATYGEPFLL RDKDTRKLAD FNTSFTFRFD GKNSTVPPHD  120
QGLAFFLALN GSLLNRALRV GGNMGLPGNN SVENVTEPSN EYPFVAVEFV TFRNSRSTVE  180
DPDCGHVGIK INSSNNITKP WNSGIMEGEH NRAWIGYNSS SKNLSVSLTT YVNDAREQVI  240
ISLSSLVDLN KYLPDWVIVG FSSSTGTAPA LVDIMSWDFT STSLVGDGSL ALFSQEKKGQ  300
SLVPEPSPRT NNVKSRRRKK RMGVVISSAI GGFILACILG LGLYNSCKKR ATGGRADTDL  360
TIPNELGEEI SLKKFSHKEL ARATRNFFDG ELLGVGRYGA FYKGCIKEWN IHVAVKKMSR  420
SELVLKEYAS QITIISRLAH RNLVQLLASK DSSSDQVSLS WAGGHFQCTC DHLASKISNQ  480
VNREFEALLH DDVMDLDMRL VDHGDVTDSE LFYFYAVSLT QSFSASHGNN SDNILGRAFG  540
SGGFVWLAGD HEFQFYECER VKEARMHGIQ TLVCIATPCG VVELASLDVI KEDYGLVHLS  600
KSLFGSDGNN NNNRRLSKQQ TSREGNILDP ILENELFSAD QIELTRQDAG GINEAAPINV  660
GGSSPESPSN SVGNFTSENT KNKTRSKNRG RSSNNGAASR QSQLSNHVEA EKQRRERLNH  720
RFCVLRSVVP NVSKMDRSSL LADAVAYINQ LKSKVEELDA KVQEQPQKPK AGNNTTAASV  780
VEVDVYVKVM GSEAKIRVQS PDQDYPYAKL MNALKGLGLQ VYHASISSVK ELMIQDVVAR  840
LPYGFTSEEV LRNGIIKGWS H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	321	RRRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	3e-52	bHLH family protein