PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP037187.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 277aa MW: 31581.2 Da PI: 5.8021

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP037187.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.1	5.4e-22	95	155	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+lFe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ PCP037187.1 95 RQRWTPTPVQLQILERLFEQgNGTPSKQKIKEITTELsqhgQISETNVYNWFQNRRARSKR 155 89***************99************************************97 PP
2	Wus_type_Homeobox	101.8	5e-33	94	157	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+l+++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq PCP037187.1 94 ARQRWTPTPVQLQILERLFEQGNGTPSKQKIKEITTELSQHGQISETNVYNWFQNRRARSKRKQ 157 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MMEWDKQQLK EQQEMEGNGN GSGNNGNGGV MYVKVMTDEQ LETLRKQIAV YATICEQLVE 60 MHKNLTAQQD LAGVRMGNLY CDPLMTSTGH KITARQRWTP TPVQLQILER LFEQGNGTPS 120 KQKIKEITTE LSQHGQISET NVYNWFQNRR ARSKRKQQNA ACNHAESEVE TEVDSPKDKK 180 TRPEETFQSQ QHSAQRTEDL CFQSPEISSD LHFLDPHATA VDKMFPSHSG LRSSRHLSEM 240 SFYDEVLANS RHELMTGKME AGNYSLFQEA EDYGMTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	157	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-97	WOX family protein