PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037192.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Nin-like
Protein Properties Length: 330aa    MW: 37983.4 Da    PI: 9.9619
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037192.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.74.2e-27203252352
       RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  ++isl+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl
  PCP037192.1 203 ASISLSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSL 252
                  78**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDSCDCDPHL LRSLLVFKNT INQELIRSLH VYGLDEGKRN EVEREFVFRE NGLYVELSAE  60
PVLRLMKFPA SQVLQGHVNG CWVCILAFHE NSPPDFTCIP SVLSVSRNPK LKTIPRLSND  120
LQMIFELSCK TDDKKSLQRS REETSQGSND SNHKSRRWPI LDLDLNSLPS PVTMSESSED  180
QESGRSSPGI TEKKRRAPSG RIASISLSDL AKYFDLPIVE ASRNLNVGLT VLKKKCREFG  240
IPRWPHRKIK SLDSLIRDLQ EETEIQQKEN KAAALAVLKR QRMLERERES IERRPFLEMK  300
TETKRFRQDV FKRRHRARAL RSQGLSTSAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-85Nin-like family protein