PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP037215.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 352aa MW: 38760.4 Da PI: 7.5882

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP037215.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde+l ++++ +G g+W++ ++ g+ R++k+c++rw +yl PCP037215.1 14 RGKWTAEEDEILTKYIHAHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	55.9	9.8e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e +v++++ lG++ W++Ia++++ gRt++ +k++w+++l PCP037215.1 67 RGNFTAEEEETIVKLHRALGNR-WSLIAAHLP-GRTDNGIKNYWNSHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGRAPCCEKL GLKRGKWTAE EDEILTKYIH AHGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRAELKRGNF TAEEEETIVK LHRALGNRWS LIAAHLPGRT DNGIKNYWNS HLSRKIYSFI 120 KLGNEHLPSI LNDVKKITSC NKRCMGARAS RSTMNNKSKN KNLATFNSRK SEANRQLGNP 180 SLPTGTIINL GQVGNEDSNL RGLESWDPIK NRDGEAIGML GMQSSCLDSA EMINLDPCGE 240 QKKSAQLCLG KKENNITSSS TAIYGDNDCE TEVLGTSCEC VDAMDQNNNI FEIEERRSTG 300 IWSSSNAAES GGGGGGGELY SFASSMNSGF DDEWLNWGWA GGGLQCHNGE LE

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGRAPCCEKL GLKRGKWTAE EDEILTKYIH AHGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRAELKRGNF TAEEEETIVK LHRALGNRWS LIAAHLPGRT DNGIKNYWNS HLSRKIYSFI  120
KLGNEHLPSI LNDVKKITSC NKRCMGARAS RSTMNNKSKN KNLATFNSRK SEANRQLGNP  180
SLPTGTIINL GQVGNEDSNL RGLESWDPIK NRDGEAIGML GMQSSCLDSA EMINLDPCGE  240
QKKSAQLCLG KKENNITSSS TAIYGDNDCE TEVLGTSCEC VDAMDQNNNI FEIEERRSTG  300
IWSSSNAAES GGGGGGGELY SFASSMNSGF DDEWLNWGWA GGGLQCHNGE LE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	6e-75	MYB family protein