PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037233.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 305aa    MW: 33120.1 Da    PI: 10.4705
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037233.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.6e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
      PCP037233.1  5 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfstilHLRSNVDLKDKWRN 55
                     79***********************************88**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV LKHGAGKWRT ILTDPEFSTI LHLRSNVDLK DKWRNINVTA  60
IWGSRQKAKL ALKRNLPTPK HDNNPLAVST VIQSHEEVVD AKPLAISGGK SQTIESKDSK  120
QPIARLDHLI LEAITNLKEP GGSDRAAIAM HIEEQYWAPP KLKKLLSSKL KNMTATGKLI  180
KVKHRYRIPL SSATSEKRRS SSALLLEGKQ KDSSRKDKSD INILTKSQVD ADLTKMRSMT  240
AQEAAAAAAQ AVAEAEAAIA AAEEAAREAE AAEAEAEAAQ VFAKAAMKAL KCRKIGKVLL  300
SNFAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.17e-71MYB_related family protein