PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037267.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 140aa    MW: 15348.6 Da    PI: 10.2203
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037267.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87e-193670135
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  PCP037267.1 36 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 70
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MSYRMLDPSD KGSESDEMTI KTPDAGSSEE GFKKTCADCG TSKTPLWRGG PAGPKSLCNA  60
CGIRSRKKRR AILGLNKENP NDKKGKKNKQ LGDGLKQRLL ALGREVLMQR STVERQQRKL  120
GEEEQAAVLL MALSYGSVYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16787KKRRAILGLNKENPNDKKGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-54GATA family protein