PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP037493.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

VOZ

Protein Properties

Length: 493aa MW: 54699.4 Da PI: 6.0347

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP037493.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	435.5	7.3e-134	208	424	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaflgpkcalwdc+rpaqg++w+ dycssfha+lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna elfdl PCP037493.1 208 PPPSAFLGPKCALWDCPRPAQGMDWWLDYCSSFHAALALNEGPPGVGPVLRPGGIGLKDGLLFAALSAKAQGKSVGIPECEGAATAKSPWNARELFDL 305 89********************************************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 s+lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp ++fewhlyeyein++d +alyrlelklvd+kk++ PCP037493.1 306 SVLEGEVIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPVNHFEWHLYEYEINKCDVCALYRLELKLVDGKKNS 403 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 kgk+++ds+adlqk++grl+a PCP037493.1 404 KGKLTNDSVADLQKQMGRLSA 424 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MKGSKSNCKS ASHKLFKDKA KNRVDDLQGM FMDLQFARKE SRSIDAALLE EQVHQMLREW 60 KAELNEPSPA SSLQQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQNLQVGG 120 SSVFHEGFSV NQGQQEHAIP LADQCKSSPS GVRNVAVNNL EGANQLDYHQ FELHQDFEQS 180 FYPCFSGTAL SGEDTLPQVS TYLPSIFPPP SAFLGPKCAL WDCPRPAQGM DWWLDYCSSF 240 HAALALNEGP PGVGPVLRPG GIGLKDGLLF AALSAKAQGK SVGIPECEGA ATAKSPWNAR 300 ELFDLSVLEG EVIREWLFFD KPRRAFESGN RKQRSLPDYN GRGWHESRKQ VMNEFGGLKR 360 SYYMDPQPVN HFEWHLYEYE INKCDVCALY RLELKLVDGK KNSKGKLTND SVADLQKQMG 420 RLSAEFPTDN KRTVKGRAKI NARVGVGNVC YSPNRGAITN ATFDYGSGAP YDYLLDDVNG 480 YYLTKPKNFD GLE

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MKGSKSNCKS ASHKLFKDKA KNRVDDLQGM FMDLQFARKE SRSIDAALLE EQVHQMLREW  60
KAELNEPSPA SSLQQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQNLQVGG  120
SSVFHEGFSV NQGQQEHAIP LADQCKSSPS GVRNVAVNNL EGANQLDYHQ FELHQDFEQS  180
FYPCFSGTAL SGEDTLPQVS TYLPSIFPPP SAFLGPKCAL WDCPRPAQGM DWWLDYCSSF  240
HAALALNEGP PGVGPVLRPG GIGLKDGLLF AALSAKAQGK SVGIPECEGA ATAKSPWNAR  300
ELFDLSVLEG EVIREWLFFD KPRRAFESGN RKQRSLPDYN GRGWHESRKQ VMNEFGGLKR  360
SYYMDPQPVN HFEWHLYEYE INKCDVCALY RLELKLVDGK KNSKGKLTND SVADLQKQMG  420
RLSAEFPTDN KRTVKGRAKI NARVGVGNVC YSPNRGAITN ATFDYGSGAP YDYLLDDVNG  480
YYLTKPKNFD GLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein