PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037573.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YC
Protein Properties Length: 161aa    MW: 18799.3 Da    PI: 6.1493
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037573.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC125.81.7e-3961157395
        NF-YC   3 ksfwekq...iekatdfk..nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 
                    fw++q   i ++t ++  +he+Plar+k+i+k+d +vk is+e+P+l+skacelfi+eltlrswlh+ee+krrtl+++di+ a+ + +  dflv i
  PCP037573.1  61 DLFWNQQlfeI-QNTPVRktHHEFPLARVKRIMKSDGKVKLISSETPILFSKACELFIMELTLRSWLHTEESKRRTLQHCDISRAIRNDQLLDFLVSI 157
                  67*****6533.3333433689*************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MDLNHSINFS SSSSTSSPFD DFIPLDSFML PDCDPHLSTK EEEDHEAKRS SFTQLQKENI  60
DLFWNQQLFE IQNTPVRKTH HEFPLARVKR IMKSDGKVKL ISSETPILFS KACELFIMEL  120
TLRSWLHTEE SKRRTLQHCD ISRAIRNDQL LDFLVSIANL F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.11e-34NF-YC family protein