PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037958.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C3H
Protein Properties Length: 104aa    MW: 11507.9 Da    PI: 5.8083
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037958.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH352.5e-113660226
                 -S---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                 +++ C++++rt tCky  +CkF+H+
  PCP037958.1 36 GEKDCSYYMRTLTCKYETNCKFNHP 60
                 7899********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MGFLDMYYIS PGRRIELPSV APALELNFSG LPIRPGEKDC SYYMRTLTCK YETNCKFNHP  60
DPTAAGESRP QSAYGNGRPA SLQGLPNSQG INSEATEWNG YQVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63260.11e-19C3H family protein