PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP037960.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 176aa    MW: 20167.6 Da    PI: 10.48
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP037960.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.91.4e-1688173192
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f+k +++s+v++  +l+lpk+f+  +   +  + tltle e g++++v++   + ++  + ++GW++F+ an+L +g  +vF+l++  +f++
  PCP037960.1  88 FVKSMIRSNVSSCFCLTLPKQFCHLY--LPLHDATLTLEVEGGEKYRVTF--LGERR--IVSAGWQKFCTANKLLVGNLLVFRLVRPLKFKC 173
                  89*********************555..3455679***************..66653..4688********************998666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MLAVRLQVEV EQREQTLETK QNVLSTCRRP SRPTHITKRK VPGHPQKHGD GGCKRKRTIF  60
DSFKDHEISF VRNQVQDIQA NLGADPVFVK SMIRSNVSSC FCLTLPKQFC HLYLPLHDAT  120
LTLEVEGGEK YRVTFLGERR IVSAGWQKFC TANKLLVGNL LVFRLVRPLK FKCFIG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13857KRKVPGHPQKHGDGGCKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-25B3 family protein