PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP038028.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 249aa MW: 28589.7 Da PI: 7.6456

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP038028.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.4	1.2e-16	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd+ll ++++q+G g W++ + g++R++k+c++rw++yl PCP038028.1 5 PWTKEEDQLLRKCIEQHGEGKWHRLPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP
2	Myb_DNA-binding	49.4	1e-15	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eE +l+++++++lG++ W+++a++++ gRt++++k++w+ + PCP038028.1 56 RGNFEEEEVDLIIKLHRLLGNR-WSSVAARLP-GRTGNDVKNYWNCH 100 89******************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MGGIPWTKEE DQLLRKCIEQ HGEGKWHRLP LLAGLNRCRK SCRLRWLNYL RPNIKRGNFE 60 EEEVDLIIKL HRLLGNRWSS VAARLPGRTG NDVKNYWNCH LSKRLNAQQD HQSEYHINNK 120 HDAVRNINNG VKVIRSQASN SAGTSSSKRP SYAPTPHQPV IVFVQDEGSS TGPMPKLCNF 180 NGNGQNNNQI FENNNSTGIN ASHHPMDDDL PPFDQQVKEY HQGSDDGDQV NRKWEWDDSI 240 FADMDIWTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-51	MYB family protein