PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038034.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 260aa    MW: 29386 Da    PI: 7.344
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-1067114355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++ e+Er+RR+++N+ f+ Lr+llP++     + ++ a++   ++ Y+++Lq
  PCP038034.1  67 QSNFEAERKRRNKLNDVFHILRTLLPNN-----TGMDRASVIGDTIAYVSKLQ 114
                  5789***********************9.....67999999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDLYLCFICF LVSSFVLVAF FLLTCAGTRG GMNMMMTLPS LRQMRGSLVR LKSWKLSEDQ  60
RNEKVPQSNF EAERKRRNKL NDVFHILRTL LPNNTGMDRA SVIGDTIAYV SKLQRQVKEL  120
AGELELNSNG GAKETSYICG NNSNLQSEFL RQMETIIANT PENEKMEPQV EVTELDVNEF  180
SVTVLCEHKP GGFVRLMEAL DTLGLEVTYA NVTSFKTLIF NVFKVQKNDS TGKIVQADHV  240
KDSLLEITRK LSMESIIRVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.15e-51bHLH family protein