PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038266.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C3H
Protein Properties Length: 85aa    MW: 9525.23 Da    PI: 4.6658
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038266.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH43.36e-145375426
                 ---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                 e C+++++tG Ck+G++CkF+H+
  PCP038266.1 53 EDCSYYLKTGSCKFGSNCKFNHP 75
                 89********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MELSEQSEQS DGGEGWGGNQ GWEGDGGGVE EKKAVETQES NRRYQYPVRP EAEDCSYYLK  60
TGSCKFGSNC KFNHPVRRKP NQDCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63260.21e-16C3H family protein