PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP038326.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 243aa MW: 27607.5 Da PI: 9.1603

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP038326.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.9	1.4e-27	69	157	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Y++YA++vGF++r+ + ++s+r+g+i +r+f C+keg+r+++k+k+ + rr+r+etr gCka+++ +kek+gkw+vtkle H H++ PCP038326.1 69 EYYDAYATRVGFRIRVGNFHRSNRDGSINSRKFLCNKEGFRDNKKSKRGEVRRSREETREGCKAMIMARKEKSGKWVVTKLEIRHCHPM 157 69*************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MTADPTPMES EADLNKPVVE SSVERDVPNT ESGEMLDSNN GTELIENKVN GILEPYVGME 60 FDSEEAVKEY YDAYATRVGF RIRVGNFHRS NRDGSINSRK FLCNKEGFRD NKKSKRGEVR 120 RSREETREGC KAMIMARKEK SGKWVVTKLE IRHCHPMWIS RGKKVTIPAP SQDEKDKKIR 180 ELSAELYRAN QQLAECRKTL EMVLKELKGM KARCSYARTR FLVPADAILF HTGADIGVSI 240 GIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	5e-47	FAR1 family protein