PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038570.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 127aa    MW: 14446.2 Da    PI: 5.168
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038570.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.44.9e-1881121101
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  +p GfrFhPtd+elv+ yL+ ++ + k   + +i+e++++ ++ Pw   +++ +    +++++fF + ++++ +++r++r + + g+W++t +dk + 
  PCP038570.1   8 MPLGFRFHPTDQELVSSYLRDRALSGKPLGKPFIQEFNLFgQTPPWVVWEQFGGnslLDQDLFFFYELRSRSDSDSRSKRqIEAGGTWSETSSDKVLG 105
                  699*****************9988777566578****98725678888654433223456889999999999999999995556899*****998766 PP

          NAM  94 skkgelvg 101
                    +g  +g
  PCP038570.1 106 L-DGIPIG 112
                  5.555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MEVGYYGMPL GFRFHPTDQE LVSSYLRDRA LSGKPLGKPF IQEFNLFGQT PPWVVWEQFG  60
GNSLLDQDLF FFYELRSRSD SDSRSKRQIE AGGTWSETSS DKVLGLDGIP IGDKGHFRSF  120
FPDLKGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.11e-10NAC family protein