PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038604.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 115aa    MW: 13129.7 Da    PI: 4.7444
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038604.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-0912332446
                     HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                     W++Ia++++ gRt++++k++w++
      PCP038604.1 12 WSKIAKHLP-GRTDNEIKNYWRT 33
                     *********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MFIAAFLMLF LWSKIAKHLP GRTDNEIKNY WRTRIQKHIK QAENITPGQS SEVNDQAITS  60
QVSISNTVDT MDISHSAPTY QANMDAYPPP LPADQSNESY WSMEDLWSLQ LLNGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G40350.14e-28MYB family protein