PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP038627.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 264aa    MW: 29562 Da    PI: 5.0463
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP038627.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09155203455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR +iN+++  L+ ++P +   ++k +  a +L + ++Y++sLq
  PCP038627.1 155 SHSLAERVRRGKINERLRCLQNIVPGC---SNKTMGMAVMLDEIINYVQSLQ 203
                  8**************************...9999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MSEFTEDFQS IKPSFPFLDI DPNMELVNQF ADQFNIPSVM EYPSLNFHTY MPFSNDSYLF  60
SNQEPEFPAG NMVENFPKLE VHQIVADGNE SKKRIAVDDA SQSSSGISTP PVSETGITRK  120
NSAGRGKRVK SNEKEDEKPK EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQNIVPG  180
CSNKTMGMAV MLDEIINYVQ SLQNQIEFLS MRLAAASSFY DFNTSTDVTE TMQIAAELER  240
LKREAAGYGG FGASFQSTSS TWSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.23e-56bHLH family protein