PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039001.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 207aa    MW: 23210.2 Da    PI: 7.9422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.8e-1381130355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +hn+ Er RR++iN+ ++ Lr+llP +   + k  s   +  +A +YI +Lq
  PCP039001.1  81 LNHNASERDRRKKINNLYASLRSLLPAD---QTKMFSIPNTISHALKYIPELQ 130
                  68*************************9...6555***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MLALSPPLFS TVGWPLEDPI SHDYNYFYKD NITTTTINDQ TAQSSLHILP SHQLQAELDR  60
STPSTTISGE YSRVSPMATK LNHNASERDR RKKINNLYAS LRSLLPADQT KMFSIPNTIS  120
HALKYIPELQ KQVEGLNGKR EELLSRASKQ EGVMHAVKKV KITARSSLSA GSTYRLNDTE  180
VAIQISTFKS DNNLLSEILL HLEEEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-34bHLH family protein