PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP039237.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 351aa MW: 38702.4 Da PI: 8.9401

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP039237.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.5	6.3e-54	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhP+deel+++yL +k+++ +++ ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++ PCP039237.1 9 LPPGFRFHPSDEELITFYLMNKINDATFTG-RAIADVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATSTGYWKTTGKDKEIFNSiTS 105 79***********************999.89***********99999*************************************9999 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 el g+kktLvfy+grap+gek++Wvmheyr+ PCP039237.1 106 ELFGMKKTLVFYRGRAPRGEKSNWVMHEYRI 136 99*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MTAEPKEDLP PGFRFHPSDE ELITFYLMNK INDATFTGRA IADVDLNKCE PWELPAKAKM 60 GEKEWYFFSL RDRKYPTGVR TNRATSTGYW KTTGKDKEIF NSITSELFGM KKTLVFYRGR 120 APRGEKSNWV MHEYRIHSKS GFRTSKDEWV VCRVFQKSAG IKKYPTNQSR AANPYNLEIG 180 PSMVPSPLMQ LGDPNHHQFP YGRNYMTSAE MAELSRVFRG GGGGGGGSSS STINLPIQPQ 240 FNYPIDGGGG GGGVGGGAGG FTISGLNLNL GGPASQPTLR TMPPAQMHHH GPPSMNHHHQ 300 VQDVTMMNGP DHQAGYGTID MNNSNNATGG SGSRFMNMDP CADLENYWPS Y

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MTAEPKEDLP PGFRFHPSDE ELITFYLMNK INDATFTGRA IADVDLNKCE PWELPAKAKM  60
GEKEWYFFSL RDRKYPTGVR TNRATSTGYW KTTGKDKEIF NSITSELFGM KKTLVFYRGR  120
APRGEKSNWV MHEYRIHSKS GFRTSKDEWV VCRVFQKSAG IKKYPTNQSR AANPYNLEIG  180
PSMVPSPLMQ LGDPNHHQFP YGRNYMTSAE MAELSRVFRG GGGGGGGSSS STINLPIQPQ  240
FNYPIDGGGG GGGVGGGAGG FTISGLNLNL GGPASQPTLR TMPPAQMHHH GPPSMNHHHQ  300
VQDVTMMNGP DHQAGYGTID MNNSNNATGG SGSRFMNMDP CADLENYWPS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-105	NAC family protein