PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039264.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 207aa    MW: 24000.2 Da    PI: 9.3175
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039264.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.6e-101763654
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   +E++RR+r++  +++L +llPk+  + ++ ls  e   +A++YIks 
  PCP039264.1 17 RVVEKNRRNRMKLFYSNLYSLLPKQ--TFKEPLSQTEQIDEAIKYIKSQ 63
                 679*********************7..59999***************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDRNQANESS STKVERRVVE KNRRNRMKLF YSNLYSLLPK QTFKEPLSQT EQIDEAIKYI  60
KSQESKLQKL KEKKESLMRT RKRSYATACV NVESTRSAKA PQIKIHEIDS TLEVVLISGL  120
ENHQFMFYEI IRLLDAEHAN VVHANFSTLG DSVFHGVRAE MGKSMSKFGA ARITEKLNRF  180
VNGSTSDQES QQDYFCDFEF QPVTTWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-19bHLH family protein