PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039285.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 249aa    MW: 27745.5 Da    PI: 7.8678
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039285.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-2055104255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa a+++a++k++g
  PCP039285.1  55 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAAIAYDNAALKFKG 104
                  7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MSAMVSALTQ VIGTTDDHAA VQPNPTSISD SSLLVKQEPD RSQPVQDQEP VRRRHYRGVR  60
QRPWGKWAAE IRDPKKAARV WLGTFETAED AAIAYDNAAL KFKGTKAKLN FPERVQGKTD  120
FGILMGSSGS TTSSSGAAST QRTQNLMTPA GHIVNPQRAT APLMMSQQPE TFPDLYQYAR  180
LLSGNDADFY NYSSYPFNQD PRFTSQFLPS STHFSSSTAS QDSQPSQQRQ QDHEEDGRNK  240
DWNLSNPRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.11e-29ERF family protein