PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039567.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 160aa    MW: 18473.6 Da    PI: 6.7965
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039567.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM951.2e-2981421128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratk..sgyWkatgkdkev 92 
                  lp+GfrF Ptdeelv++yL +kv ++++++++ i+e+d    y  +P++L  +++ +e+ew+fF++++++++  ++r+ r++    g+Wk  g++ ++
  PCP039567.1   8 LPVGFRFMPTDEELVTHYLMNKVFHRPVPAAQEIREIDaagFYGGHPKNLV-TFSCGEREWFFFIHQSESSHAsQRRSIRVVGngLGFWKPNGSEDPI 104
                  79*************************888776777763337888*****6.777899***999998887765156677776634678********** PP

          NAM  93 lskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  ++++g++   k +L+++  + + +++++t+W m ey l
  PCP039567.1 105 CDEDGNAFASKISLTYFsrTSSLSRAKRTHWKMVEYYL 142
                  *****************5434678899*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MIINSDQLPV GFRFMPTDEE LVTHYLMNKV FHRPVPAAQE IREIDAAGFY GGHPKNLVTF  60
SCGEREWFFF IHQSESSHAS QRRSIRVVGN GLGFWKPNGS EDPICDEDGN AFASKISLTY  120
FSRTSSLSRA KRTHWKMVEY YLHEHDHVES NTEEKYQGKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.15e-20NAC family protein