PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039690.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 100aa    MW: 11492.6 Da    PI: 11.2926
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039690.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.86.5e-252271251
      G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
                 prlrWtpeLH++F++a+e+  G++kA  k +l+lm+v+gLt++hvkSHLQ
  PCP039690.1 22 PRLRWTPELHRCFLQAIERFRGHKKAAAKLVLQLMDVQGLTISHVKSHLQ 71
                 8************************************************* PP
2Myb_DNA-binding36.61e-112372146
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46
                     r+rWT+e++  +++a++++ g+     k++ + m  +g+t  ++ks++q 
      PCP039690.1 23 RLRWTPELHRCFLQAIERFRGHkkaAAKLVLQLMDvQGLTISHVKSHLQV 72
                     89******************99**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MTSSSCSARN IVVRQSVRSN VPRLRWTPEL HRCFLQAIER FRGHKKAAAK LVLQLMDVQG  60
LTISHVKSHL QVIYGTREGL VQLQQDLKKE LIVILNLFFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.12e-25G2-like family protein