PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039712.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 101aa    MW: 12164 Da    PI: 10.9457
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039712.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.000157196429
                 HHHHHHHHHHHHHHHHHHHHHCTSCC CS
          HLH  4 ahnerErrRRdriNsafeeLrellPk 29
                 +h e Er+RR+++    + Lr+llP 
  PCP039712.1 71 MHRESERQRRQEMGILHASLRSLLPL 96
                 699*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MFPLHQSKKL VFQISSNPRH HHDHTISEDR RVPEHGNMGK SRRRKLAVTL DYMMDDDHKS  60
NDHNKKKKMF MHRESERQRR QEMGILHASL RSLLPLEFIK V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14268RRRKLAVTLDYMMDDDHKSNDHNKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.15e-11bHLH family protein