PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039762.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 173aa    MW: 20028.6 Da    PI: 7.4042
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039762.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.52.3e-1358415100
                  -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
           B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                  + ++p+kf+ ++g+    s  + l+ +sg +W v+l  r+ +g++++ +GW eF k   L+ g  +vF+++g+ +f  +v +f+ks
  PCP039762.1   5 MQRIPRKFVMKYGEG--ISNPVCLKLPSGSEWIVEL--RRWDGEVWFDNGWPEFSKFYSLDCGHWLVFRYEGNYNF--NVCIFDKS 84 
                  568*********744..6667***************..999999**************************998888..99999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MFSAMQRIPR KFVMKYGEGI SNPVCLKLPS GSEWIVELRR WDGEVWFDNG WPEFSKFYSL  60
DCGHWLVFRY EGNYNFNVCI FDKSCTEIEY PLTMPKMELT SHDESRDNSA NDSSDDYGED  120
LSYKSGDGSG DKFLPCPRKT REKSTLPSPQ PHKKRITSSS GKHYKISPEV KLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137143PRKTREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.19e-23B3 family protein