PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP039792.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

VOZ

Protein Properties

Length: 483aa MW: 53944.3 Da PI: 6.1507

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP039792.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	438.5	8.7e-135	207	423	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaflgpkcalwdc+rpaqg++w+ dycssfha+lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk vgipecegaatakspwna+e+fdl PCP039792.1 207 PPPSAFLGPKCALWDCPRPAQGFDWWLDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKGVGIPECEGAATAKSPWNAPEFFDL 304 89********************************************************************************************** PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 s+lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+kk++ PCP039792.1 305 SVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKNS 402 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 k+k+++ds+adlqk++grl+a PCP039792.1 403 KSKLTNDSVADLQKQMGRLSA 423 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MKGSKSTCKS ASHKLFKDKA KNRVDDLQGM FTDLQFARKE SRSIDAALLE EQVHQMLREW 60 KAELNEPSSA SSFQQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQNLQVGE 120 SLAFHEGFSV NQGQQEHTFP MADQCKSSPS GVRNAVNNLE GANQLDYHQF ELHQDFEQSF 180 YPCFHGTALR GEDTLSQAST YLPSIFPPPS AFLGPKCALW DCPRPAQGFD WWLDYCSSFH 240 AALALNEGPP GMGPVLRPGG IGLKDGLLFA ALSAKAQGKG VGIPECEGAA TAKSPWNAPE 300 FFDLSVLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQV MNEFGGLKRS 360 YYMDPQPLNH FEWHLYEYEI NKCDACALYR LELKLVDGKK NSKSKLTNDS VADLQKQMGR 420 LSAEFPSDNK RTVKGRAKVN AKVSVGNVYY APNRGATTNG TFDYEMGAPY DYLVDNVNGY 480 YRT

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MKGSKSTCKS ASHKLFKDKA KNRVDDLQGM FTDLQFARKE SRSIDAALLE EQVHQMLREW  60
KAELNEPSSA SSFQQQGGSL GSFSSDICRL LQLCEEEDDA TSPLAAPKPE PNDQNLQVGE  120
SLAFHEGFSV NQGQQEHTFP MADQCKSSPS GVRNAVNNLE GANQLDYHQF ELHQDFEQSF  180
YPCFHGTALR GEDTLSQAST YLPSIFPPPS AFLGPKCALW DCPRPAQGFD WWLDYCSSFH  240
AALALNEGPP GMGPVLRPGG IGLKDGLLFA ALSAKAQGKG VGIPECEGAA TAKSPWNAPE  300
FFDLSVLEGE IIREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQV MNEFGGLKRS  360
YYMDPQPLNH FEWHLYEYEI NKCDACALYR LELKLVDGKK NSKSKLTNDS VADLQKQMGR  420
LSAEFPSDNK RTVKGRAKVN AKVSVGNVYY APNRGATTNG TFDYEMGAPY DYLVDNVNGY  480
YRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein