PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP039866.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 246aa MW: 29009.7 Da PI: 7.5045

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP039866.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	2e-15	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll + ++ lG g W+ ++++ g++R++k+c++rw++yl PCP039866.1 13 KGAWTREEDDLLRQRIEILGEGKWHQVPHKAGLNRCRKSCRLRWLNYL 60 79********************************************97 PP
2	Myb_DNA-binding	49.9	7.5e-16	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E +l+v+++k+lG++ W++Ia +++ gRt +++k++w++ PCP039866.1 66 RGDFTEDEVDLIVRLHKLLGNR-WSLIAGRLP-GRTSNDVKNYWNT 109 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MEGYNVNLSV MRKGAWTREE DDLLRQRIEI LGEGKWHQVP HKAGLNRCRK SCRLRWLNYL 60 KPNIKRGDFT EDEVDLIVRL HKLLGNRWSL IAGRLPGRTS NDVKNYWNTR LRIDSRVKTM 120 KNKFQETRKT IVIRPQPQKF IQSSYYLNSK EPILDQIQSA EDLSTPSQTL SSTKNGNDWW 180 ETLLEDEDTF ERIACPSLQL EEEHFTSFWL DDMQQSSRSC VTFPEVGQSR GDFSLNMDLW 240 DHSKDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-56	MYB family protein