PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP039895.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 177aa MW: 20494.8 Da PI: 8.8794

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP039895.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.1	5.8e-56	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ PCP039895.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYD- 104 69**************************.9***********953432233667**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 k +l+g++ktLvfykgrap+g+k+dW+mheyrle PCP039895.1 105 KAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 138 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MMESIESTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK SVYDKAKLIG MRKTLVFYKG 120 RAPNGQKSDW IMHEYRLESD ENGPPQASDR NSSSSSSSSS SSSSLSTHTQ THTHTHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-101	NAC family protein