PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039927.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 83aa    MW: 9522.78 Da    PI: 10.727
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039927.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP53.37.1e-174354677
                 TSSEEETTT--SS--S-STTTT-------S-- CS
          SBP 46 CsrfhelsefDeekrsCrrrLakhnerrrkkq 77
                 C rfh+l efD++krsCrrrLa+hnerrrk+ 
  PCP039927.1  4 CCRFHQLPEFDDTKRSCRRRLAGHNERRRKNP 35
                 9*****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MLLCCRFHQL PEFDDTKRSC RRRLAGHNER RRKNPAESHA VEGSIRNVGA GTQFKDVCGQ  60
VDDSGRIRIT IPGNSTHKHF HIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.12e-17SBP family protein