PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP040191.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 341aa    MW: 38290.8 Da    PI: 6.4111
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP040191.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.3e-0858105354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+i   +++ +k+L
  PCP040191.1  58 IQKADREKLRRDRLNEQFLELGNVLDPD----RPKNDKATIIADTIQVLKDL 105
                  56789*******************9997....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDQPKHEDLN QSAPPPFSFA AEFPQPASDR RVPPTRSQPN SSQRPEGEVK DCLTARKIQK  60
ADREKLRRDR LNEQFLELGN VLDPDRPKND KATIIADTIQ VLKDLTLEVD KIKSECVSLT  120
EESRELTHEK NDLREEKASL KSDIENLNAQ YQQRIRTMFP WGAMDHSVVM APXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXP HMQPYHYFGN QNPGVIPNPC STYLPYITPN TLVEQQSTQY  240
ISPIVHPGSQ SQVSGKQEAI NKSPGESQVH KSDDSIDVTT ELELKTPGST SDQDLSSVRR  300
KSKKSARPEN REGSSSSRCS SSRSVQDSSS NSVVGGKKAD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-87bHLH family protein